Virus Load

Updated February, 2009

Chinese Version

Mark Holodniy, M.D

Associate Professor of Medicine

Director of the HIV Clinical Program and AIDS Research Center at Veterans Affairs Medical Center, Palo Alto.

Division of Infectious Diseases and Geographic  Medicine

Stanford University,

Stanford, CA

 

               During acute HIV infection, plasma HIV RNA levels range from 105 to 107 copies/ml and drop about 1- 2 logs after seroconversion as equilibrium develops between virus replication and immunologic containment. In a chronically infected untreated individual, on the order of 103-106 virions/ml are present in plasma; whereas the concentration of virus in lymph nodes is usually two-to-three orders of magnitude higher. This steady-state level is highly variable among patients and is strongly predictive of disease progression (19, 21, 35).

               Although plasma HIV RNA levels may be up to 2-fold lower in women than in men during the early stages of HIV infection (1, 10, 31), the levels increase slowly over time (about 0.1 log10 per year) in both women and men and are comparable in patients of either sex with CD4 counts <100 cells/mm3 (1, 31). Although some clinicians believe that the plasma HIV RNA threshold for starting antiretroviral therapy should be lower for women than for men (10), this is not standard practice.

               Acute infections, vaccinations, or even tuberculin skin testing may cause transient increases in plasma HIV RNA levels of up to 0.5 log10 copies/ml in untreated patients or in treated patients with poorly controlled virus replication (11, 18, 22, 28, 32).

Viral Load Monitoring During Treatment

               Within 1-2 weeks of starting highly active antiretroviral therapy (HAART) in a previously untreated patient, plasma HIV RNA levels decrease to about 1% of their pre-treatment levels. A viral load of <50 copies/ml can usually be achieved within 16 weeks. Based on observations such as these, criteria have been established for viral load thresholds that define treatment failure and indicate a change in regimen. For example, patients who have not achieved a 0.5 to 0.75 log10 copies/ml reduction in viral load by 4 weeks, a 1 log10 copies/ml reduction by 8 weeks, or an undetectable viral load (<50 copies/ml) by 20-24 weeks should be considered for a treatment modification or change.

               The nadir viral load level, which depends on a patient's baseline viral load and the potency of the HAART regimen, often predicts the duration of a patient's response to treatment (15). Indeed, previously untreated patients who maintain a viral load <50 copies/ml for six or more months are at extremely low risk of developing virologic rebound provided they do not discontinue their medications (24). In contrast, patients who do not achieve a viral load of <50 copies/ml are more likely to demonstrate virologic failure within the first year (25).

               In patients discontinuing therapy, viral load generally return to the baseline pretreatment level upon discontinuation of HAART (5, 6, 13) (8).

Plasma HIV Viral Load Testing

               Plasma HIV RNA levels are used to determine the likelihood of disease progression, to make decisions about starting antiretroviral therapy, and to monitor response to therapy. Quantitative plasma HIV RNA assays have replaced p24 antigen assays and qualitative proviral DNA assays as the most sensitive means for diagnosing acute HIV infection in seroconverting individuals and for screening blood donations. In clinical trials, plasma HIV RNA levels are also used to assess the efficacy of new antiretroviral drugs and drug treatment regimens. The indications for plasma HIV RNA testing are summarized in Table 1.

Commercially Available Quantitative Assays

               There are three commercial FDA approved assays for quantifying plasma HIV-1 RNA: (i) AMPLICOR HIV Monitor Test Version 1.5 (Roche Diagnostics Systems) is a quantitative PCR assay, (ii) Versant HIV-1 RNA 3.0 Assay (Bayer Diagnostics) is a branched DNA (bDNA) signal amplification assay, (iii) Nuclisens HIV RNA QT (BioMerieux) uses a non-PCR-based method of amplification (NASBA; nucleic acid sequence based amplification). The standard format of the AMPLICOR assay has a linear range of 400 – 750,000 copies/ml; the ultrasensitive format has a linear range of 50 – 75,000 copies/ml. The bDNA assay has a linear range of 50 – 500,000 copies/ml. The Nuclisens assay has a linear range of 200 – 5,000,000 copies/ml.

               All three assays have been shown to be accurate and reproducible in multiple comparative studies (4, 17, 26, 29). Nonetheless, the results of these assays may differ by as much as 0.5 logs10 and clinicians should not test samples from the same patient with different assays (4, 30). Plasma HIV RNA assay variability may also be caused by both technical and biological factors. Technical variability, defined as the standard deviation of testing the same sample multiple times is about 0.2 log10 copies/ml (3, 20). Biological variability, defined as the standard deviation of testing plasma samples obtained over brief periods of time from patients with stable treatment (or no treatment) is about 0.3 log10 copies/ml (2, 3, 7).

               All three assays have improved ability to quantify non-B subtypes relative to earlier versions (9, 23, 33). But whether they are as accurate for quantifying non-B viruses compared with subtype B viruses is not known.

               For analysis with any of the commercially available assays, plasma should be collected in tubes containing the anticoagulants EDTA or ACD (acid citrate dextrose) but not heparin (12, 16, 27). Due to the instability of viral RNA in whole blood, plasma should be separated within four to six hours of collection and should be separated and frozen at –20°C to –70°C if it is not tested immediately (14).

FDA: FDA Approves First Nucleic Acid Test to Screen for Additional Types of HIV In Donated Blood and Tissues. December, 2008. http://www.fda.gov/bbs/topics/NEWS/2008/NEW01936.html

 

Tables and Figures

Table 1. Indications for Plasma HIV RNA Testing

Clinical indication

Information

Use

Syndrome consistent with acute HIV infection

Establish diagnosis when HIV antibody test is negative or indeterminate

Diagnosis

Initial evaluation of newly diagnosed HIV infection (together with CD4 counts)

Baseline viral load "set point"

Decision to start or defer therapy

Every 3-4 months in patients not on therapy (together with CD4 counts)

Changes in viral load

Decision to start or defer therapy

2-8 weeks after beginning therapy

Initial assessment of drug efficacy

Decision to continue or change therapy

3-4 months after start of therapy

Maximal effect of therapy

Decision to continue or change therapy

Every 3-4 months in patients on therapy*

Durability of antiretroviral effect

Decision to continue or change therapy

Within 2 weeks of a viral load blip

Detect early virologic failure

Decision to continue or change therapy

Clinical event or significant decline in CD4 count

Association with changing or stable viral load

Decision to continue, initiate, or change therapy

Footnote:  Adopted from Table 2 of the DHHS guidelines (34). *The IAS-USA guidelines recommend checking plasma HIV RNA levels every 2-3 months in this situation. (36)

 

REFERENCES

1. Anastos, K., S. J. Gange, B. Lau, B. Weiser, R. Detels, J. V. Giorgi, J. B. Margolick, M. Cohen, J. Phair, S. Melnick, C. R. Rinaldo, A. Kovacs, A. Levine, S. Landesman, M. Young, A. Munoz, and R. M. Greenblatt. 2000. Association of race and gender with HIV-1 RNA levels and immunologic progression. J Acquir Immune Defic Syndr 24:218-26. [PubMed]

2. Bartlett, J. A., R. DeMasi, D. Dawson, and A. Hill. 1998. Variability in repeated consecutive measurements of plasma human immunodeficiency virus RNA in persons receiving stable nucleoside reverse transcriptase inhibitor therapy or no treatment. J Infect Dis 178:1803-5. [PubMed]

3. Brambilla, D., P. S. Reichelderfer, J. W. Bremer, D. E. Shapiro, R. C. Hershow, D. A. Katzenstein, S. M. Hammer, B. Jackson, A. C. Collier, R. S. Sperling, M. G. Fowler, and R. W. Coombs. 1999. The contribution of assay variation and biological variation to the total variability of plasma HIV-1 RNA measurements. The Women Infant Transmission Study Clinics. Virology Quality Assurance Program. Aids 13:2269-79. [PubMed]

4. CDC. 2001. Guidelines for laboratory test result reporting of human immunodeficiency virus type 1 ribonucleic acid determination: recommendations from a CDC working group. MMWR Morb Mortal Wkly Rep 50(No. RR-20). [PubMed]

5. Davey, R. T., Jr., N. Bhat, C. Yoder, T. W. Chun, J. A. Metcalf, R. Dewar, V. Natarajan, R. A. Lempicki, J. W. Adelsberger, K. D. Miller, J. A. Kovacs, M. A. Polis, R. E. Walker, J. Falloon, H. Masur, D. Gee, M. Baseler, D. S. Dimitrov, A. S. Fauci, and H. C. Lane. 1999. HIV-1 and T cell dynamics after interruption of highly active antiretroviral therapy (HAART) in patients with a history of sustained viral suppression. Proc Natl Acad Sci U S A 96:15109-14. [PubMed]

6. de Jong, M. D., R. J. de Boer, F. de Wolf, N. A. Foudraine, C. A. Boucher, J. Goudsmit, and J. M. Lange. 1997. Overshoot of HIV-1 viraemia after early discontinuation of antiretroviral treatment. AIDS 11:F79-F84. [PubMed]

7. Deeks, S. G., R. L. Coleman, R. White, C. Pachl, M. Schambelan, D. N. Chernoff, and M. B. Feinberg. 1997. Variance of plasma human immunodeficiency virus type 1 RNA levels measured by branched DNA within and between days. J Infect Dis 176:514-7. [PubMed]

8. Deeks, S. G., R. M. Grant, T. Wrin, E. E. Paxinos, T. Liegler, R. Hoh, J. N. Martin, and C. J. Petropoulos. 2003. Persistence of drug-resistant HIV-1 after a structured treatment interruption and its impact on treatment response. Aids 17:361-70. [PubMed]

9. Elbeik, T., W. G. Alvord, R. Trichavaroj, M. de Souza, R. Dewar, A. Brown, D. Chernoff, N. L. Michael, P. Nassos, K. Hadley, and V. L. Ng. 2002. Comparative analysis of HIV-1 viral load assays on subtype quantification: Bayer Versant HIV-1 RNA 3.0 versus Roche Amplicor HIV-1 Monitor version 1.5. J Acquir Immune Defic Syndr 29:330-9. [PubMed]

10. Farzadegan, H., D. R. Hoover, J. Astemborski, C. M. Lyles, J. B. Margolick, R. B. Markham, T. C. Quinn, and D. Vlahov. 1998. Sex differences in HIV-1 viral load and progression to AIDS. Lancet 352:1510-4. [PubMed]

11. Garcia, F., C. Vidal, J. M. Gatell, J. M. Miro, A. Cruceta, and T. Pumarola. 1998. Changes in HIV-1 RNA viral load following tuberculin skin test. J Acquir Immune Defic Syndr Hum Retrovirol 18:398-9. [PubMed]

12. Ginocchio, C. C., X. P. Wang, M. H. Kaplan, G. Mulligan, D. Witt, J. W. Romano, M. Cronin, and R. Carroll. 1997. Effects of specimen collection, processing, and storage conditions on stability of human immunodeficiency virus type 1 RNA levels in plasma. J Clin Microbiol 35:2886-93. [PubMed]

13. Harrigan, P. R., M. Whaley, and J. S. Montaner. 1999. Rate of HIV-1 RNA rebound upon stopping antiretroviral therapy. AIDS 13:F59-62. [PubMed]

14. Holodniy, M., L. Mole, B. Yen-Lieberman, D. Margolis, C. Starkey, R. Carroll, T. Spahlinger, J. Todd, and J. B. Jackson. 1995. Comparative stabilities of quantitative human immunodeficiency virus RNA in plasma from samples collected in VACUTAINER CPT, VACUTAINER PPT, and standard VACUTAINER tubes. J Clin Microbiol 33:1562-6. [PubMed]

15. Kempf, D. J., R. A. Rode, Y. Xu, E. Sun, M. E. Heath-Chiozzi, J. Valdes, A. J. Japour, S. Danner, C. Boucher, A. Molla, and J. M. Leonard. 1998. The duration of viral suppression during protease inhibitor therapy for HIV-1 infection is predicted by plasma HIV-1 RNA at the nadir. AIDS 12:F9-14. [PubMed]

16. Kirstein, L. M., J. W. Mellors, C. R. Rinaldo, Jr., J. B. Margolick, J. V. Giorgi, J. P. Phair, E. Dietz, P. Gupta, C. H. Sherlock, R. Hogg, J. S. Montaner, and A. Munoz. 1999. Effects of anticoagulant, processing delay, and assay method (branched DNA versus reverse transcriptase PCR) on measurement of human immunodeficiency virus type 1 RNA levels in plasma. J Clin Microbiol 37:2428-33. [PubMed]

17. Lin, H. J., L. Pedneault, and F. B. Hollinger. 1998. Intra-assay performance characteristics of five assays for quantification of human immunodeficiency virus type 1 RNA in plasma. J Clin Microbiol 36:835-9. [PubMed]

18. Marchisio, P., S. Esposito, N. Zanchetta, R. Tornaghi, M. R. Gismondo, and N. Principi. 1998. Effect of superimposed infections on viral replication in human immunodeficiency virus type 1-infected children. Pediatr Infect Dis J 17:755-7. [PubMed]

19. Mellors, J. W., A. Munoz, J. V. Giorgi, J. B. Margolick, C. J. Tassoni, P. Gupta, L. A. Kingsley, J. A. Todd, A. J. Saah, R. Detels, J. P. Phair, and C. R. Rinaldo, Jr. 1997. Plasma viral load and CD4+ lymphocytes as prognostic markers of HIV-1 infection. Ann Intern Med. 126:946-954. [PubMed]

20. Murphy, D. G., P. Gonin, and M. Fauvel. 1999. Reproducibility and performance of the second-generation branched-DNA assay in routine quantification of human immunodeficiency virus type 1 RNA in plasma. J Clin Microbiol 37:812-4. [PubMed]

21. O'Brien, T. R., P. S. Rosenberg, F. Yellin, and J. J. Goedert. 1998. Longitudinal HIV-1 RNA levels in a cohort of homosexual men. J Acquir Immune Defic Syndr Hum Retrovirol 18:155-61. [PubMed]

22. Ortigao-de-Sampaio, M. B., R. J. Shattock, P. Hayes, G. E. Griffin, M. I. Linhares-de-Carvalho, A. Ponce de Leon, D. J. Lewis, and L. R. Castello-Branco. 1998. Increase in plasma viral load after oral cholera immunization of HIV-infected subjects. Aids 12:F145-50. [PubMed]

23. Parekh, B., S. Phillips, T. C. Granade, J. Baggs, D. J. Hu, and R. Respess. 1999. Impact of HIV type 1 subtype variation on viral RNA quantitation. AIDS Res. Hum. Retroviruses 15:133-142. [PubMed]

24. Phillips, A. N., V. Miller, C. Sabin, A. Cozzi Lepri, S. Klauke, M. Bickel, H. W. Doerr, A. Hill, and S. Staszewski. 2001. Durability of HIV-1 viral suppression over 3.3 years with multi-drug antiretroviral therapy in previously drug-naive individuals. Aids 15:2379-84. [PubMed]

25. Raboud, J. M., J. S. Montaner, B. Conway, S. Rae, P. Reiss, S. Vella, D. Cooper, J. Lange, M. Harris, M. A. Wainberg, P. Robinson, M. Myers, and D. Hall. 1998. Suppression of plasma viral load below 20 copies/ml is required to achieve a long-term response to therapy. AIDS 12:1619-1624. [PubMed]

26. Revets, H., D. Marissens, S. de Wit, P. Lacor, N. Clumeck, S. Lauwers, and G. Zissis. 1996. Comparative evaluation of NASBA HIV-1 RNA QT, AMPLICOR-HIV monitor, and QUANTIPLEX HIV RNA assay, three methods for quantification of human immunodeficiency virus type 1 RNA in plasma. J Clin Microbiol 34:1058-64. [PubMed]

27. Saag, M. S., M. Holodniy, D. R. Kuritzkes, W. A. O'Brien, R. Coombs, M. E. Poscher, D. M. Jacobsen, G. M. Shaw, D. D. Richman, and P. A. Volberding. 1996. HIV viral load markers in clinical practice. Nat.Med. 2:625-629. [PubMed]

28. Schacker, T., J. Zeh, H. Hu, M. Shaughnessy, and L. Corey. 2002. Changes in plasma human immunodeficiency virus type 1 RNA associated with herpes simplex virus reactivation and suppression. J Infect Dis 186:1718-25. [PubMed]

29. Schuurman, R., D. Descamps, G. J. Weverling, S. Kaye, J. Tijnagel, I. Williams, L. R. van, R. Tedder, C. A. Boucher, F. Brun-Vezinet, and C. Loveday. 1996. Multicenter comparison of three commercial methods for quantification of human immunodeficiency virus type 1 RNA in plasma. J.Clin.Microbiol. 34:3016-3022. [PubMed]

30. Segondy, M., J. Izopet, I. Pellegrin, B. Montes, B. Dumon, C. Pasquier, M. Peeters, H. J. Fleury, J. Puel, and J. Reynes. 1998. Comparison of the QUANTIPLEX HIV-1 RNA 2.0 assay with the AMPLICOR HIV-1 MONITOR 1.0 assay for quantitation of levels of human immunodeficiency virus type 1 RNA in plasma of patients receiving stavudine-didanosine combination therapy. J Clin Microbiol 36:3392-5. [PubMed]

31. Sterling, T. R., C. M. Lyles, D. Vlahov, J. Astemborski, J. B. Margolick, and T. C. Quinn. 1999. Sex differences in longitudinal human immunodeficiency virus type 1 RNA levels among seroconverters. J Infect Dis 180:666-72. [PubMed]

32. Sulkowski, M. S., R. E. Chaisson, C. L. Karp, R. D. Moore, J. B. Margolick, and T. C. Quinn. 1998. The effect of acute infectious illnesses on plasma human immunodeficiency virus (HIV) type 1 load and the expression of serologic markers of immune activation among HIV-infected adults. J Infect Dis 178:1642-8. [PubMed]

33. Triques, K., J. Coste, J. L. Perret, C. Segarra, E. Mpoudi, J. Reynes, E. Delaporte, A. Butcher, K. Dreyer, S. Herman, J. Spadoro, and M. Peeters. 1999. Efficiencies of four versions of the AMPLICOR HIV-1 MONITOR test for quantification of different subtypes of human immunodeficiency virus type 1. J.Clin.Microbiol. 37:110-116. [PubMed]

34. US Department of Health and Human Services Panel on Clinical Practices for Treatment of HIV Infection, A. 2002. Guidelines for the use of antiretroviral agents in HIV-1-infected adults and adolescents (The living document, February 4, 2002), http://www.aidsinfo.nih.gov/guidelines/adult%5Chtml_adult_02-04-02.html. [PubMed]

35. Vidal, C., F. Garcia, J. Romeu, L. Ruiz, J. M. Miro, A. Cruceta, A. Soriano, T. Pumarola, B. Clotet, and J. M. Gatell. 1998. Lack of evidence of a stable viral load set-point in early stage asymptomatic patients with chronic HIV-1 infection. Aids 12:1285-9. [PubMed]

36. Yeni, P. G., S. M. Hammer, C. C. Carpenter, D. A. Cooper, M. A. Fischl, J. M. Gatell, B. G. Gazzard, M. S. Hirsch, D. M. Jacobsen, D. A. Katzenstein, J. S. Montaner, D. D. Richman, M. S. Saag, M. Schechter, R. T. Schooley, M. A. Thompson, S. Vella, and P. A. Volberding. 2002. Antiretroviral treatment for adult HIV infection in 2002: Updated recommendations of the International AIDS Society-USA Panel. Jama 288:222-35. [PubMed]